Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PaaKPhenylacetate-coenzyme A ligase. (445 aa)    
Predicted Functional Partners:
GatA_1
Amidase.
    
  0.901
NylA
Amidase; Belongs to the amidase family.
    
  0.901
SufS_1
Aminotransferase class V.
 
     0.842
Lche_0524
Dihydroorotate dehydrogenase electron transfer subunit.
 
  
 0.717
Lche_0535
Hypothetical protein.
 
     0.707
Lche_2559
Pyoverdine biosynthesis regulatory protein SyrP-like protein.
 
     0.664
Lche_2996
RasGEF domain protein.
  
     0.614
Efe
Iron/ascorbate oxidoreductase family protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
       0.596
Lche_2573
Multidrug efflux protein.
  
     0.587
Lche_0602
Taurine catabolism dioxygenase TauD, TfdA family.
 
     0.584
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.