Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HapE_1 | Lche_0617 | Lche_0559 | Lche_0617 | Flavin containing monooxygenase. | Hypothetical protein. | 0.419 |
HapE_2 | Lche_0617 | Lche_2051 | Lche_0617 | Dimethylaniline monooxygenase. | Hypothetical protein. | 0.441 |
HapE_2 | Lche_2511 | Lche_2051 | Lche_2511 | Dimethylaniline monooxygenase. | Hypothetical protein. | 0.409 |
Lche_0616 | Lche_0617 | Lche_0616 | Lche_0617 | Amine oxidase, flavin containing. | Hypothetical protein. | 0.502 |
Lche_0617 | HapE_1 | Lche_0617 | Lche_0559 | Hypothetical protein. | Flavin containing monooxygenase. | 0.419 |
Lche_0617 | HapE_2 | Lche_0617 | Lche_2051 | Hypothetical protein. | Dimethylaniline monooxygenase. | 0.441 |
Lche_0617 | Lche_0616 | Lche_0617 | Lche_0616 | Hypothetical protein. | Amine oxidase, flavin containing. | 0.502 |
Lche_0617 | Lche_2511 | Lche_0617 | Lche_2511 | Hypothetical protein. | Hypothetical protein. | 0.402 |
Lche_0617 | lysS | Lche_0617 | Lche_1281 | Hypothetical protein. | lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.456 |
Lche_0617 | rpoA | Lche_0617 | Lche_3349 | Hypothetical protein. | DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.675 |
Lche_0617 | rpoB | Lche_0617 | Lche_3380 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.437 |
Lche_0617 | rpoC | Lche_0617 | Lche_3379 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.509 |
Lche_2511 | HapE_2 | Lche_2511 | Lche_2051 | Hypothetical protein. | Dimethylaniline monooxygenase. | 0.409 |
Lche_2511 | Lche_0617 | Lche_2511 | Lche_0617 | Hypothetical protein. | Hypothetical protein. | 0.402 |
lysS | Lche_0617 | Lche_1281 | Lche_0617 | lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. | Hypothetical protein. | 0.456 |
lysS | rpoA | Lche_1281 | Lche_3349 | lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. | DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.647 |
lysS | rpoB | Lche_1281 | Lche_3380 | lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.668 |
lysS | rpoC | Lche_1281 | Lche_3379 | lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.593 |
rpoA | Lche_0617 | Lche_3349 | Lche_0617 | DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Hypothetical protein. | 0.675 |
rpoA | lysS | Lche_3349 | Lche_1281 | DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.647 |
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