close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lche_0630IcmK protein. (383 aa)    
Predicted Functional Partners:
Lche_0631
Protein IcmE (DotG).
 
 
 
 0.996
Lche_0629
Protein IcmL (DotI).
 
   
 0.954
dotC
Defect in organelle trafficking lipoprotein DotC.
 
 
 
 0.894
dotF
Component of the Dot/Icm secretion system.
   
 
 0.883
Lche_0635
IcmJ protein.
 
   
 0.871
lphA
LphA (DotK).
   
   0.852
Lche_0636
Protein IcmB (DotO).
 
     0.845
Lche_0626
Protein IcmO (DotL).
 
   
 0.823
Lche_0625
IcmP protein.
 
   
 0.813
Lche_0633
IcmC (DotE).
     
 0.761
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.