STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lche_0665Hypothetical protein. (140 aa)    
Predicted Functional Partners:
Lche_0666
Transmembrane protein.
 
     0.903
dnaB
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
    
   0.838
dotA
Defect in organelle trafficking protein DotA.
  
     0.772
Lche_0957
Enhanced entry protein EnhA.
  
     0.769
Lche_1005
Hypothetical protein.
  
     0.755
Lche_0635
IcmJ protein.
  
     0.750
YdgA
Putative membrane protein YdgA-like protein.
  
     0.749
Lche_2838
Putative helicase/relaxase.
  
     0.749
enhA_1
Enhanced entry protein EnhA.
  
     0.747
ankH
Ankyrin repeat-containing protein H.
  
     0.746
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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