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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lche_0701Hypothetical protein. (93 aa)    
Predicted Functional Partners:
gshA
Glutamate--cysteine ligase.
  
     0.746
Lche_0635
IcmJ protein.
 
     0.611
enhA_2
Enhanced entry protein EnhA.
 
     0.577
pssA
CDP-diacylglycerol-serine O-phosphatidyltransferase (phosphatidylserine synthase); Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.571
Lche_2819
Hypothetical protein.
  
     0.526
enhA_1
Enhanced entry protein EnhA.
 
     0.524
Lche_0957
Enhanced entry protein EnhA.
 
     0.522
dotC
Defect in organelle trafficking lipoprotein DotC.
 
    0.517
Lche_0629
Protein IcmL (DotI).
  
     0.513
Lche_0626
Protein IcmO (DotL).
  
     0.510
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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