STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lche_0709Ankyrin repeat protein. (474 aa)    
Predicted Functional Partners:
pksJ_1
Polyketide synthase, type I.
  
 0.896
Lche_1834
acyl-CoA synthetase.
  
 0.896
Lche_2715
acyl-CoA synthetase.
  
 0.896
yjeA
Endo-1,4-beta-xylanase.
  
 
 0.853
Lche_0544
Calcium-transporting ATPase.
  
   0.789
Lche_0252
L-gulono-gamma-lactone oxidase.
  
 
   0.781
Lche_0522
Protein phosphatase 2C.
  
 
   0.774
ankK
Substrate of the Dot/Icm secretion system.
  
     0.773
Lche_2502
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase.
  
 
   0.773
Lche_2232
Tubulin-tyrosine ligase family protein.
  
     0.766
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.