Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lche_0781 | Lche_0782 | Lche_0781 | Lche_0782 | Conjugative transfer protein TraB. | Conjugative transfer protein. | 0.785 |
Lche_0781 | traC | Lche_0781 | Lche_0783 | Conjugative transfer protein TraB. | F pilus assembly protein TraC. | 0.948 |
Lche_0781 | traW | Lche_0781 | Lche_0785 | Conjugative transfer protein TraB. | Type-F conjugative transfer system protein. | 0.947 |
Lche_0781 | trbI | Lche_0781 | Lche_0784 | Conjugative transfer protein TraB. | F pilus extension/retraction protein TrbI Inner membrane protein. | 0.785 |
Lche_0782 | Lche_0781 | Lche_0782 | Lche_0781 | Conjugative transfer protein. | Conjugative transfer protein TraB. | 0.785 |
Lche_0782 | traC | Lche_0782 | Lche_0783 | Conjugative transfer protein. | F pilus assembly protein TraC. | 0.782 |
Lche_0782 | traW | Lche_0782 | Lche_0785 | Conjugative transfer protein. | Type-F conjugative transfer system protein. | 0.787 |
Lche_0782 | trbI | Lche_0782 | Lche_0784 | Conjugative transfer protein. | F pilus extension/retraction protein TrbI Inner membrane protein. | 0.800 |
traC | Lche_0781 | Lche_0783 | Lche_0781 | F pilus assembly protein TraC. | Conjugative transfer protein TraB. | 0.948 |
traC | Lche_0782 | Lche_0783 | Lche_0782 | F pilus assembly protein TraC. | Conjugative transfer protein. | 0.782 |
traC | traW | Lche_0783 | Lche_0785 | F pilus assembly protein TraC. | Type-F conjugative transfer system protein. | 0.948 |
traC | trbI | Lche_0783 | Lche_0784 | F pilus assembly protein TraC. | F pilus extension/retraction protein TrbI Inner membrane protein. | 0.782 |
traW | Lche_0781 | Lche_0785 | Lche_0781 | Type-F conjugative transfer system protein. | Conjugative transfer protein TraB. | 0.947 |
traW | Lche_0782 | Lche_0785 | Lche_0782 | Type-F conjugative transfer system protein. | Conjugative transfer protein. | 0.787 |
traW | traC | Lche_0785 | Lche_0783 | Type-F conjugative transfer system protein. | F pilus assembly protein TraC. | 0.948 |
traW | trbI | Lche_0785 | Lche_0784 | Type-F conjugative transfer system protein. | F pilus extension/retraction protein TrbI Inner membrane protein. | 0.787 |
trbI | Lche_0781 | Lche_0784 | Lche_0781 | F pilus extension/retraction protein TrbI Inner membrane protein. | Conjugative transfer protein TraB. | 0.785 |
trbI | Lche_0782 | Lche_0784 | Lche_0782 | F pilus extension/retraction protein TrbI Inner membrane protein. | Conjugative transfer protein. | 0.800 |
trbI | traC | Lche_0784 | Lche_0783 | F pilus extension/retraction protein TrbI Inner membrane protein. | F pilus assembly protein TraC. | 0.782 |
trbI | traW | Lche_0784 | Lche_0785 | F pilus extension/retraction protein TrbI Inner membrane protein. | Type-F conjugative transfer system protein. | 0.787 |