STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lche_0809Bacterioferritin (cytochrome b1). (154 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.931
plaC
Lysophospholipase A.
  
     0.562
SseJ_1
Lipolytic enzyme, GDSL family.
  
     0.540
plaA
Lysophospholipase A.
  
     0.532
DosC
Regulatory protein (GGDEF domain).
   
    0.499
Lip-1
Lysophospholipase A.
  
     0.494
Cph1_1
Two-component sensor histidine kinase.
   
  
 0.483
Cph1_2
Sensory box histidine kinase.
   
  
 0.478
Cya
Guanylate cyclase.
   
    0.472
Lche_0808
3',5'-cyclic-nucleotide phosphodiesterase.
       0.458
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.