STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spkBSerine/threonine-protein kinase B. (627 aa)    
Predicted Functional Partners:
Lche_2697
Pentapeptide repeats (8 copies).
 
     0.744
pipB
Secreted effector protein PipB.
 
     0.724
Lche_2636
Protein IcmE (DotG).
 
     0.666
pipB2
Secreted effector protein pipB2.
 
    0.648
Lche_2559
Pyoverdine biosynthesis regulatory protein SyrP-like protein.
  
     0.544
Gmr_2
Inner membrane protein/sensory box protein LssE.
 
  
 0.539
Lche_0818
Hypothetical protein.
       0.528
Lche_0535
Hypothetical protein.
 
   
 0.451
SseJ_2
Phospholipase/lecithinase/hemolysin.
  
   0.415
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.