STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lche_0860Eukaryotic small stress protein PASS1. (316 aa)    
Predicted Functional Partners:
Lche_0861
O-methyltransferase.
 
    0.812
Lche_1117
Choline kinase.
  
     0.750
Lche_0077
Putative secreted esterase.
  
     0.747
rplP
50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.
    
   0.744
Lche_0071
Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase.
  
     0.737
Lche_0108
D12 class N6 adenine-specific DNA methyltransferase.
  
     0.737
Lche_0168
Putative conjugative transfer protein TraI.
  
     0.736
Lche_2250
NHL repeat protein.
  
     0.729
besA
Ferri-bacillibactin esterase BesA.
  
     0.726
Lche_0127
Aminoglycoside 6'-N-acetyltransferase.
  
     0.710
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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