Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lche_0099 | Lche_0860 | Lche_0099 | Lche_0860 | Phosphotransferase enzyme family protein. | Eukaryotic small stress protein PASS1. | 0.525 |
Lche_0099 | Lche_0861 | Lche_0099 | Lche_0861 | Phosphotransferase enzyme family protein. | O-methyltransferase. | 0.434 |
Lche_0099 | Lche_1834 | Lche_0099 | Lche_1834 | Phosphotransferase enzyme family protein. | acyl-CoA synthetase. | 0.417 |
Lche_0099 | Lche_2715 | Lche_0099 | Lche_2715 | Phosphotransferase enzyme family protein. | acyl-CoA synthetase. | 0.417 |
Lche_0099 | PksJ_4 | Lche_0099 | Lche_0862 | Phosphotransferase enzyme family protein. | Polyketide synthase. | 0.612 |
Lche_0099 | PksL | Lche_0099 | Lche_1120 | Phosphotransferase enzyme family protein. | Polyketide synthase. | 0.681 |
Lche_0099 | pksJ_1 | Lche_0099 | Lche_0504 | Phosphotransferase enzyme family protein. | Polyketide synthase, type I. | 0.417 |
Lche_0860 | Lche_0099 | Lche_0860 | Lche_0099 | Eukaryotic small stress protein PASS1. | Phosphotransferase enzyme family protein. | 0.525 |
Lche_0860 | Lche_0861 | Lche_0860 | Lche_0861 | Eukaryotic small stress protein PASS1. | O-methyltransferase. | 0.812 |
Lche_0860 | PksJ_4 | Lche_0860 | Lche_0862 | Eukaryotic small stress protein PASS1. | Polyketide synthase. | 0.703 |
Lche_0860 | PksL | Lche_0860 | Lche_1120 | Eukaryotic small stress protein PASS1. | Polyketide synthase. | 0.706 |
Lche_0861 | Lche_0099 | Lche_0861 | Lche_0099 | O-methyltransferase. | Phosphotransferase enzyme family protein. | 0.434 |
Lche_0861 | Lche_0860 | Lche_0861 | Lche_0860 | O-methyltransferase. | Eukaryotic small stress protein PASS1. | 0.812 |
Lche_0861 | Lche_1834 | Lche_0861 | Lche_1834 | O-methyltransferase. | acyl-CoA synthetase. | 0.502 |
Lche_0861 | Lche_2506 | Lche_0861 | Lche_2506 | O-methyltransferase. | acyl-CoA synthetase. | 0.536 |
Lche_0861 | Lche_2715 | Lche_0861 | Lche_2715 | O-methyltransferase. | acyl-CoA synthetase. | 0.559 |
Lche_0861 | PksJ_2 | Lche_0861 | Lche_0505 | O-methyltransferase. | Hypothetical protein. | 0.482 |
Lche_0861 | PksJ_4 | Lche_0861 | Lche_0862 | O-methyltransferase. | Polyketide synthase. | 0.663 |
Lche_0861 | PksL | Lche_0861 | Lche_1120 | O-methyltransferase. | Polyketide synthase. | 0.411 |
Lche_0861 | YcgJ | Lche_0861 | Lche_2976 | O-methyltransferase. | Methyltransferase. | 0.499 |
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