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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RssAPatatin-like phospholipase. (617 aa)    
Predicted Functional Partners:
CyaB_1
Guanylate/adenylate cyclase.
  
 0.652
pksJ_1
Polyketide synthase, type I.
  
 0.619
Lche_1834
acyl-CoA synthetase.
  
 0.619
Lche_2715
acyl-CoA synthetase.
  
 0.619
PksJ_4
Polyketide synthase.
  
 0.586
Lche_3057
Ras family GTPase.
  
 
  0.579
Lche_2792
6-pyruvoyl tetrahydropterin synthase.
    
  0.576
LuxQ_2
Sensory histidine-kinase / response regulator.
  
 
 0.573
ArcB_1
Sensory box histidine kinase/response regulator.
  
 
 0.573
Nqo1
NADH dehydrogenase I subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
 
  
 0.565
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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