STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lche_0899Hypothetical protein; Belongs to the UPF0276 family. (287 aa)    
Predicted Functional Partners:
Lche_0900
Hypothetical protein.
 
  
 0.995
Lche_1675
Signal peptide protein.
 
  
 0.963
Lche_0898
Silver efflux pump.
 
     0.862
lvhB3
Type IV secretion system protein VirB3.
   
    0.669
Lche_0592
Carboxymuconolactone decarboxylase family transporter; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
   
  
 0.613
pacL
Cation efflux transporter.
   
    0.563
Lche_0544
Calcium-transporting ATPase.
   
    0.563
mgtA
Magnesium transporter.
   
    0.563
Lche_2501
Hypothetical protein.
   
    0.483
Lche_0219
O-methyltransferase.
   
    0.434
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.