STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lche_0958IcmL-like protein. (288 aa)    
Predicted Functional Partners:
SecA_2
Coiled-coil protein.
  
 
   0.801
Lche_2838
Putative helicase/relaxase.
  
 
 
 0.789
hutG
Formimidoylglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.
       0.786
dotA
Defect in organelle trafficking protein DotA.
  
    0.772
Lche_2306
Hypothetical protein.
  
  
 0.768
dotC
Defect in organelle trafficking lipoprotein DotC.
  
     0.765
ankK
Substrate of the Dot/Icm secretion system.
  
     0.761
Lche_0636
Protein IcmB (DotO).
  
     0.757
yjeA
Endo-1,4-beta-xylanase.
 
     0.757
Lche_0631
Protein IcmE (DotG).
  
    0.754
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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