Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FadD | Hcl | Lche_2267 | Lche_0961 | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | 0.847 |
FadD | Lche_1834 | Lche_2267 | Lche_1834 | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | acyl-CoA synthetase. | 0.866 |
FadD | Lche_2506 | Lche_2267 | Lche_2506 | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | acyl-CoA synthetase. | 0.908 |
FadD | Lche_2715 | Lche_2267 | Lche_2715 | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | acyl-CoA synthetase. | 0.865 |
FadD | LgrB | Lche_2267 | Lche_1936 | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.855 |
FadD | MenE | Lche_2267 | Lche_2507 | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | Acyl CoA ligase. | 0.859 |
FadD | fadB | Lche_2267 | Lche_1358 | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.666 |
FadD | lidS | Lche_2267 | Lche_1495 | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | acyl-CoA synthetase. | 0.853 |
FadD | pksJ_1 | Lche_2267 | Lche_0504 | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | Polyketide synthase, type I. | 0.834 |
FadD | yfcX | Lche_2267 | Lche_1464 | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.666 |
Hcl | FadD | Lche_0961 | Lche_2267 | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | 0.847 |
Hcl | Lche_1834 | Lche_0961 | Lche_1834 | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | acyl-CoA synthetase. | 0.848 |
Hcl | Lche_2506 | Lche_0961 | Lche_2506 | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | acyl-CoA synthetase. | 0.934 |
Hcl | Lche_2715 | Lche_0961 | Lche_2715 | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | acyl-CoA synthetase. | 0.849 |
Hcl | LgrB | Lche_0961 | Lche_1936 | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.836 |
Hcl | MenE | Lche_0961 | Lche_2507 | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | Acyl CoA ligase. | 0.859 |
Hcl | fadB | Lche_0961 | Lche_1358 | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.666 |
Hcl | lidS | Lche_0961 | Lche_1495 | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | acyl-CoA synthetase. | 0.853 |
Hcl | pksJ_1 | Lche_0961 | Lche_0504 | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | Polyketide synthase, type I. | 0.858 |
Hcl | yfcX | Lche_0961 | Lche_1464 | Acyl CoA synthetase, long chain fatty acid:CoA ligase. | Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.666 |
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