Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AidB | etfA | Lche_2311 | Lche_1025 | acyl-CoA dehydrogenase. | Electron transfer flavoprotein, alpha subunit. | 0.890 |
AidB | etfB | Lche_2311 | Lche_1024 | acyl-CoA dehydrogenase. | Electron transfer flavoprotein beta-subunit (Beta-ETF). | 0.844 |
AidB | etfD | Lche_2311 | Lche_1289 | acyl-CoA dehydrogenase. | Electron transfer flavoprotein-ubiquinon; Accepts electrons from ETF and reduces ubiquinone. | 0.590 |
AidB | fadH | Lche_2311 | Lche_0272 | acyl-CoA dehydrogenase. | 2,4-dienoyl-CoA reductase. | 0.448 |
AidB | gcdH | Lche_2311 | Lche_0366 | acyl-CoA dehydrogenase. | glutaryl-CoA dehydrogenase. | 0.517 |
Lche_1227 | etfA | Lche_1227 | Lche_1025 | acyl-CoA dehydrogenase. | Electron transfer flavoprotein, alpha subunit. | 0.946 |
Lche_1227 | etfB | Lche_1227 | Lche_1024 | acyl-CoA dehydrogenase. | Electron transfer flavoprotein beta-subunit (Beta-ETF). | 0.856 |
Lche_1227 | etfD | Lche_1227 | Lche_1289 | acyl-CoA dehydrogenase. | Electron transfer flavoprotein-ubiquinon; Accepts electrons from ETF and reduces ubiquinone. | 0.590 |
Lche_1227 | fadH | Lche_1227 | Lche_0272 | acyl-CoA dehydrogenase. | 2,4-dienoyl-CoA reductase. | 0.448 |
Lche_2504 | etfA | Lche_2504 | Lche_1025 | acyl-CoA dehydrogenase. | Electron transfer flavoprotein, alpha subunit. | 0.912 |
Lche_2504 | etfB | Lche_2504 | Lche_1024 | acyl-CoA dehydrogenase. | Electron transfer flavoprotein beta-subunit (Beta-ETF). | 0.855 |
Lche_2504 | etfD | Lche_2504 | Lche_1289 | acyl-CoA dehydrogenase. | Electron transfer flavoprotein-ubiquinon; Accepts electrons from ETF and reduces ubiquinone. | 0.590 |
Lche_2504 | fadH | Lche_2504 | Lche_0272 | acyl-CoA dehydrogenase. | 2,4-dienoyl-CoA reductase. | 0.448 |
acdA | etfA | Lche_1050 | Lche_1025 | Acyl CoA dehydrogenase. | Electron transfer flavoprotein, alpha subunit. | 0.953 |
acdA | etfB | Lche_1050 | Lche_1024 | Acyl CoA dehydrogenase. | Electron transfer flavoprotein beta-subunit (Beta-ETF). | 0.849 |
acdA | etfD | Lche_1050 | Lche_1289 | Acyl CoA dehydrogenase. | Electron transfer flavoprotein-ubiquinon; Accepts electrons from ETF and reduces ubiquinone. | 0.590 |
acdA | fadH | Lche_1050 | Lche_0272 | Acyl CoA dehydrogenase. | 2,4-dienoyl-CoA reductase. | 0.448 |
etfA | AidB | Lche_1025 | Lche_2311 | Electron transfer flavoprotein, alpha subunit. | acyl-CoA dehydrogenase. | 0.890 |
etfA | Lche_1227 | Lche_1025 | Lche_1227 | Electron transfer flavoprotein, alpha subunit. | acyl-CoA dehydrogenase. | 0.946 |
etfA | Lche_2504 | Lche_1025 | Lche_2504 | Electron transfer flavoprotein, alpha subunit. | acyl-CoA dehydrogenase. | 0.912 |
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