Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
paaFenoyl-CoA hydratase. (258 aa)    
Predicted Functional Partners:
acdA
Acyl CoA dehydrogenase.
 
 0.970
EchA8
enoyl-CoA hydratase.
 
 
 
0.950
yfcX
Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
 
0.943
fadB
3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
0.939
gcdH
glutaryl-CoA dehydrogenase.
 
 0.891
pksJ_1
Polyketide synthase, type I.
  
 0.882
Lche_1834
acyl-CoA synthetase.
  
 0.882
Lche_2715
acyl-CoA synthetase.
  
 0.882
LuxQ_2
Sensory histidine-kinase / response regulator.
   
 0.820
ArcB_1
Sensory box histidine kinase/response regulator.
   
 0.820
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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