Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ArcB_1 | Cph1_1 | Lche_2876 | Lche_3021 | Sensory box histidine kinase/response regulator. | Two-component sensor histidine kinase. | 0.979 |
ArcB_1 | CyaB_1 | Lche_2876 | Lche_3041 | Sensory box histidine kinase/response regulator. | Guanylate/adenylate cyclase. | 0.981 |
ArcB_1 | CyaB_2 | Lche_2876 | Lche_1162 | Sensory box histidine kinase/response regulator. | Guanylate cyclase. | 0.984 |
ArcB_1 | EvgS | Lche_2876 | Lche_0477 | Sensory box histidine kinase/response regulator. | Sensory box histidine kinase/response regulator. | 0.987 |
ArcB_1 | Gmr_2 | Lche_2876 | Lche_1627 | Sensory box histidine kinase/response regulator. | Inner membrane protein/sensory box protein LssE. | 0.913 |
ArcB_1 | Lche_3289 | Lche_2876 | Lche_3289 | Sensory box histidine kinase/response regulator. | Cyclic nucleotide-binding protein. | 0.568 |
ArcB_1 | LuxQ_2 | Lche_2876 | Lche_2382 | Sensory box histidine kinase/response regulator. | Sensory histidine-kinase / response regulator. | 0.997 |
ArcB_1 | ZraS | Lche_2876 | Lche_1163 | Sensory box histidine kinase/response regulator. | Signal transduction histidine kinase. | 0.846 |
ArcB_1 | flgD | Lche_2876 | Lche_1865 | Sensory box histidine kinase/response regulator. | Flagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein. | 0.647 |
ArcB_1 | letS | Lche_2876 | Lche_1945 | Sensory box histidine kinase/response regulator. | Legionella transmission sensor LetS. | 0.982 |
Cph1_1 | ArcB_1 | Lche_3021 | Lche_2876 | Two-component sensor histidine kinase. | Sensory box histidine kinase/response regulator. | 0.979 |
Cph1_1 | CyaB_1 | Lche_3021 | Lche_3041 | Two-component sensor histidine kinase. | Guanylate/adenylate cyclase. | 0.984 |
Cph1_1 | CyaB_2 | Lche_3021 | Lche_1162 | Two-component sensor histidine kinase. | Guanylate cyclase. | 0.647 |
Cph1_1 | EvgS | Lche_3021 | Lche_0477 | Two-component sensor histidine kinase. | Sensory box histidine kinase/response regulator. | 0.697 |
Cph1_1 | Gmr_2 | Lche_3021 | Lche_1627 | Two-component sensor histidine kinase. | Inner membrane protein/sensory box protein LssE. | 0.759 |
Cph1_1 | LuxQ_2 | Lche_3021 | Lche_2382 | Two-component sensor histidine kinase. | Sensory histidine-kinase / response regulator. | 0.979 |
Cph1_1 | ZraS | Lche_3021 | Lche_1163 | Two-component sensor histidine kinase. | Signal transduction histidine kinase. | 0.701 |
Cph1_1 | letS | Lche_3021 | Lche_1945 | Two-component sensor histidine kinase. | Legionella transmission sensor LetS. | 0.977 |
CyaB_1 | ArcB_1 | Lche_3041 | Lche_2876 | Guanylate/adenylate cyclase. | Sensory box histidine kinase/response regulator. | 0.981 |
CyaB_1 | Cph1_1 | Lche_3041 | Lche_3021 | Guanylate/adenylate cyclase. | Two-component sensor histidine kinase. | 0.984 |
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