STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gshBGlutathione synthetase; Belongs to the prokaryotic GSH synthase family. (316 aa)    
Predicted Functional Partners:
gshA
Glutamate--cysteine ligase.
    
 0.986
gor
Glutathione reductase.
     
 0.941
Ggt
Gamma-glutamyltranspeptidase.
    
 0.936
gst
Glutathione S-transferase.
 
  
 0.927
PepB_2
Aminopeptidase; Belongs to the peptidase M17 family.
   
 
 0.923
pepA
Leucine aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
   
 
 0.923
PepB_1
Aminopeptidase; Belongs to the peptidase M17 family.
   
 
 0.923
pepN_2
Aminopeptidase.
    
 0.912
Lche_0558
Glutaredoxin 2.
    
 0.901
pepN_1
Aminopeptidase.
     
 0.901
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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