Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BdhA | FabG_9 | Lche_0383 | Lche_2281 | 3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Acetyoacetyl CoA reductase. | 0.848 |
BdhA | MvaB | Lche_0383 | Lche_1221 | 3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | hydroxymethylglutaryl-CoA lyase. | 0.901 |
BdhA | acsA | Lche_0383 | Lche_1220 | 3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | acetyl-CoA synthetase. | 0.901 |
FabG_9 | BdhA | Lche_2281 | Lche_0383 | Acetyoacetyl CoA reductase. | 3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.848 |
FabG_9 | FadI | Lche_2281 | Lche_2963 | Acetyoacetyl CoA reductase. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.906 |
FabG_9 | acsA | Lche_2281 | Lche_1220 | Acetyoacetyl CoA reductase. | acetyl-CoA synthetase. | 0.901 |
FabG_9 | atoB | Lche_2281 | Lche_1226 | Acetyoacetyl CoA reductase. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.906 |
FabG_9 | fabG_1 | Lche_2281 | Lche_0465 | Acetyoacetyl CoA reductase. | 3-oxoacyl-ACP reductase. | 0.901 |
FabG_9 | fabG_2 | Lche_2281 | Lche_0466 | Acetyoacetyl CoA reductase. | 3-oxoacyl-ACP reductase. | 0.907 |
FabG_9 | fadB | Lche_2281 | Lche_1358 | Acetyoacetyl CoA reductase. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.924 |
FabG_9 | yfcX | Lche_2281 | Lche_1464 | Acetyoacetyl CoA reductase. | Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.924 |
FabG_9 | yfcY | Lche_2281 | Lche_1463 | Acetyoacetyl CoA reductase. | beta-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.906 |
FadI | FabG_9 | Lche_2963 | Lche_2281 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Acetyoacetyl CoA reductase. | 0.906 |
FadI | MvaB | Lche_2963 | Lche_1221 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | hydroxymethylglutaryl-CoA lyase. | 0.927 |
FadI | acsA | Lche_2963 | Lche_1220 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acetyl-CoA synthetase. | 0.932 |
FadI | atoB | Lche_2963 | Lche_1226 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.926 |
FadI | fabG_1 | Lche_2963 | Lche_0465 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-oxoacyl-ACP reductase. | 0.906 |
FadI | fabG_2 | Lche_2963 | Lche_0466 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-oxoacyl-ACP reductase. | 0.906 |
FadI | fadB | Lche_2963 | Lche_1358 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.999 |
FadI | yfcX | Lche_2963 | Lche_1464 | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.999 |
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