STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxBThioredoxin reductase. (320 aa)    
Predicted Functional Partners:
trxA_2
Thioredoxin; Belongs to the thioredoxin family.
 
 
 0.972
ahpC_1
Alkyl hydroperoxide reductase.
  
 
 0.915
ahpC_2
Alkyl hydroperoxide reductase.
  
 
 0.915
sufS
Selenocysteine lyase, PLP-dependent; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 
 0.907
Lche_2186
Oxidoreductase, FAD-binding protein.
   
 
 0.870
MoeZ_1
Thiazole biosynthesis adenylyltransferase ThiF.
 
  
 0.852
trxA_1
Thioredoxin.
 
 
 0.835
trx
Thioredoxin; Belongs to the thioredoxin family.
 
 
 0.828
Lche_0801
Hypothetical protein.
  
 
 0.817
katA
Catalase.
   
 
 0.794
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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