Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lche_0327 | ftsK | Lche_0327 | Lche_1365 | NHL repeat protein. | DNA translocase FtsK. | 0.814 |
| Lche_2250 | ftsK | Lche_2250 | Lche_1365 | NHL repeat protein. | DNA translocase FtsK. | 0.814 |
| fimB | ftsK | Lche_0130 | Lche_1365 | Type 1 fimbriae regulatory protein FimB. | DNA translocase FtsK. | 0.670 |
| ftsK | Lche_0327 | Lche_1365 | Lche_0327 | DNA translocase FtsK. | NHL repeat protein. | 0.814 |
| ftsK | Lche_2250 | Lche_1365 | Lche_2250 | DNA translocase FtsK. | NHL repeat protein. | 0.814 |
| ftsK | fimB | Lche_1365 | Lche_0130 | DNA translocase FtsK. | Type 1 fimbriae regulatory protein FimB. | 0.670 |
| ftsK | ftsQ | Lche_1365 | Lche_0659 | DNA translocase FtsK. | Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly. | 0.718 |
| ftsK | lolA | Lche_1365 | Lche_1366 | DNA translocase FtsK. | Outer-membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.851 |
| ftsK | parB_2 | Lche_1365 | Lche_0132 | DNA translocase FtsK. | Chromosome partitioning protein ParB; Belongs to the ParB family. | 0.735 |
| ftsK | parB_4 | Lche_1365 | Lche_2522 | DNA translocase FtsK. | Partition protein ParB; Belongs to the ParB family. | 0.742 |
| ftsK | parB_5 | Lche_1365 | Lche_2810 | DNA translocase FtsK. | Chromosome partitioning protein parB; Belongs to the ParB family. | 0.729 |
| ftsK | trxB | Lche_1365 | Lche_1364 | DNA translocase FtsK. | Thioredoxin reductase. | 0.633 |
| ftsK | ycaJ | Lche_1365 | Lche_1367 | DNA translocase FtsK. | Recombination protein. | 0.836 |
| ftsQ | ftsK | Lche_0659 | Lche_1365 | Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly. | DNA translocase FtsK. | 0.718 |
| lolA | ftsK | Lche_1366 | Lche_1365 | Outer-membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | DNA translocase FtsK. | 0.851 |
| lolA | trxB | Lche_1366 | Lche_1364 | Outer-membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Thioredoxin reductase. | 0.666 |
| lolA | ycaJ | Lche_1366 | Lche_1367 | Outer-membrane lipoprotein carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Recombination protein. | 0.824 |
| parB_2 | ftsK | Lche_0132 | Lche_1365 | Chromosome partitioning protein ParB; Belongs to the ParB family. | DNA translocase FtsK. | 0.735 |
| parB_4 | ftsK | Lche_2522 | Lche_1365 | Partition protein ParB; Belongs to the ParB family. | DNA translocase FtsK. | 0.742 |
| parB_5 | ftsK | Lche_2810 | Lche_1365 | Chromosome partitioning protein parB; Belongs to the ParB family. | DNA translocase FtsK. | 0.729 |
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