STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lche_1376Transmembrane protein. (1343 aa)    
Predicted Functional Partners:
fliH
Polar flagellar assembly protein FliH.
 
     0.843
FliI
Nucleotide binding protein FliI.
       0.800
fliJ
Flagellar protein FliJ.
       0.800
Lche_1580
Methyl-transferase.
  
     0.716
Lche_1692
Hypothetical protein.
  
     0.686
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.677
Lche_2120
Major facilitator family transporter.
  
     0.677
Lche_2153
Protein LvrA.
  
     0.675
Lche_0133
Initiator Replication protein.
  
     0.667
dotA
Defect in organelle trafficking protein DotA.
  
     0.664
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.