STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iscSCysteine desulfurase. (390 aa)    
Predicted Functional Partners:
NifU
NifU family FeS assembly SUF system protein.
 
 0.999
Lche_1390
Putative iron-sulpher cluster proteins NifU.
  
 0.996
MoeZ_1
Thiazole biosynthesis adenylyltransferase ThiF.
   
 0.989
sufA
Fe-S cluster assembly protein; Belongs to the HesB/IscA family.
 
  
 0.982
Lche_2186
Oxidoreductase, FAD-binding protein.
  
 0.965
NsrR_1
Rrf2 family transporter protein.
  
  
 0.947
erpA
Iron-sulfur cluster assembly accessory protein family protein; Required for insertion of 4Fe-4S clusters for at least IspG.
 
  
 0.804
yfhQ
Methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.
       0.800
pksJ_1
Polyketide synthase, type I.
  
 
 0.795
Lche_1834
acyl-CoA synthetase.
  
 
 0.795
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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