Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lche_0077 | Lche_0095 | Lche_0077 | Lche_0095 | Putative secreted esterase. | Ankyrin repeats (3 copies). | 0.755 |
Lche_0077 | Lche_0888 | Lche_0077 | Lche_0888 | Putative secreted esterase. | Hypothetical protein. | 0.655 |
Lche_0077 | Lche_1117 | Lche_0077 | Lche_1117 | Putative secreted esterase. | Choline kinase. | 0.774 |
Lche_0077 | Lche_1392 | Lche_0077 | Lche_1392 | Putative secreted esterase. | Adenosine deaminase. | 0.698 |
Lche_0077 | Lche_2974 | Lche_0077 | Lche_2974 | Putative secreted esterase. | Hypothetical protein. | 0.757 |
Lche_0077 | recX-2 | Lche_0077 | Lche_0129 | Putative secreted esterase. | Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family. | 0.646 |
Lche_0095 | Lche_0077 | Lche_0095 | Lche_0077 | Ankyrin repeats (3 copies). | Putative secreted esterase. | 0.755 |
Lche_0095 | Lche_0888 | Lche_0095 | Lche_0888 | Ankyrin repeats (3 copies). | Hypothetical protein. | 0.762 |
Lche_0095 | Lche_1117 | Lche_0095 | Lche_1117 | Ankyrin repeats (3 copies). | Choline kinase. | 0.758 |
Lche_0095 | Lche_1392 | Lche_0095 | Lche_1392 | Ankyrin repeats (3 copies). | Adenosine deaminase. | 0.786 |
Lche_0095 | Lche_2974 | Lche_0095 | Lche_2974 | Ankyrin repeats (3 copies). | Hypothetical protein. | 0.774 |
Lche_0095 | recX-2 | Lche_0095 | Lche_0129 | Ankyrin repeats (3 copies). | Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family. | 0.745 |
Lche_0888 | Lche_0077 | Lche_0888 | Lche_0077 | Hypothetical protein. | Putative secreted esterase. | 0.655 |
Lche_0888 | Lche_0095 | Lche_0888 | Lche_0095 | Hypothetical protein. | Ankyrin repeats (3 copies). | 0.762 |
Lche_0888 | Lche_1117 | Lche_0888 | Lche_1117 | Hypothetical protein. | Choline kinase. | 0.665 |
Lche_0888 | Lche_1392 | Lche_0888 | Lche_1392 | Hypothetical protein. | Adenosine deaminase. | 0.687 |
Lche_0888 | Lche_2974 | Lche_0888 | Lche_2974 | Hypothetical protein. | Hypothetical protein. | 0.743 |
Lche_0888 | recX-2 | Lche_0888 | Lche_0129 | Hypothetical protein. | Recombination regulator RecX; Modulates RecA activity; Belongs to the RecX family. | 0.585 |
Lche_1117 | Lche_0077 | Lche_1117 | Lche_0077 | Choline kinase. | Putative secreted esterase. | 0.774 |
Lche_1117 | Lche_0095 | Lche_1117 | Lche_0095 | Choline kinase. | Ankyrin repeats (3 copies). | 0.758 |
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