Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EptA | Lche_1425 | Lche_1428 | Lche_1425 | Sulfatase. | Permease. | 0.403 |
EptA | Lche_1426 | Lche_1428 | Lche_1426 | Sulfatase. | Hypothetical protein. | 0.618 |
EptA | Lche_1427 | Lche_1428 | Lche_1427 | Sulfatase. | Pyridine nucleotide-disulfide oxidoreductase. | 0.619 |
EptA | dgkA | Lche_1428 | Lche_0520 | Sulfatase. | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | 0.402 |
EptA | pagP | Lche_1428 | Lche_2881 | Sulfatase. | Antimicrobial peptide resistance and Lipid A acylation protein PagP; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. | 0.906 |
Lche_1425 | EptA | Lche_1425 | Lche_1428 | Permease. | Sulfatase. | 0.403 |
Lche_1425 | Lche_1426 | Lche_1425 | Lche_1426 | Permease. | Hypothetical protein. | 0.551 |
Lche_1425 | Lche_1427 | Lche_1425 | Lche_1427 | Permease. | Pyridine nucleotide-disulfide oxidoreductase. | 0.551 |
Lche_1426 | EptA | Lche_1426 | Lche_1428 | Hypothetical protein. | Sulfatase. | 0.618 |
Lche_1426 | Lche_1425 | Lche_1426 | Lche_1425 | Hypothetical protein. | Permease. | 0.551 |
Lche_1426 | Lche_1427 | Lche_1426 | Lche_1427 | Hypothetical protein. | Pyridine nucleotide-disulfide oxidoreductase. | 0.800 |
Lche_1427 | EptA | Lche_1427 | Lche_1428 | Pyridine nucleotide-disulfide oxidoreductase. | Sulfatase. | 0.619 |
Lche_1427 | Lche_1425 | Lche_1427 | Lche_1425 | Pyridine nucleotide-disulfide oxidoreductase. | Permease. | 0.551 |
Lche_1427 | Lche_1426 | Lche_1427 | Lche_1426 | Pyridine nucleotide-disulfide oxidoreductase. | Hypothetical protein. | 0.800 |
dgkA | EptA | Lche_0520 | Lche_1428 | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | Sulfatase. | 0.402 |
pagP | EptA | Lche_2881 | Lche_1428 | Antimicrobial peptide resistance and Lipid A acylation protein PagP; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. | Sulfatase. | 0.906 |