rpoE protein (Legionella cherrii) - STRING interaction network

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Score

rpoE

Sigma factor RpoE (sigma 24); Belongs to the sigma-70 factor family. ECF subfamily. (184 aa)

Predicted Functional Partners:

Lche_0944

0.900

rpoB

0.889

rpoC

0.887

rpoA

0.877

CheR

0.843

rpoZ

0.817

cptB

0.756

Lche_1479

0.756

tolQ

0.722

hfq

0.702

Your Current Organism:

Legionella cherrii

NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CheR	rpoE	Lche_3046	Lche_1480	Methyltransferase involved in chemotaxis (CheR domain).	Sigma factor RpoE (sigma 24); Belongs to the sigma-70 factor family. ECF subfamily.	0.843
Lche_0944	rpoE	Lche_0944	Lche_1480	Coiled-coil protein.	Sigma factor RpoE (sigma 24); Belongs to the sigma-70 factor family. ECF subfamily.	0.900
Lche_1479	cptB	Lche_1479	Lche_1478	Hypothetical protein.	Antitoxin CptB.	0.838
Lche_1479	rpoE	Lche_1479	Lche_1480	Hypothetical protein.	Sigma factor RpoE (sigma 24); Belongs to the sigma-70 factor family. ECF subfamily.	0.756
cptB	Lche_1479	Lche_1478	Lche_1479	Antitoxin CptB.	Hypothetical protein.	0.838
cptB	rpoE	Lche_1478	Lche_1480	Antitoxin CptB.	Sigma factor RpoE (sigma 24); Belongs to the sigma-70 factor family. ECF subfamily.	0.756
cptB	tolQ	Lche_1478	Lche_1484	Antitoxin CptB.	Protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.	0.505
hfq	rpoA	Lche_2900	Lche_3349	Protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.525
hfq	rpoE	Lche_2900	Lche_1480	Protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.	Sigma factor RpoE (sigma 24); Belongs to the sigma-70 factor family. ECF subfamily.	0.702
rpoA	hfq	Lche_3349	Lche_2900	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.	0.525
rpoA	rpoB	Lche_3349	Lche_3380	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoC	Lche_3349	Lche_3379	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoE	Lche_3349	Lche_1480	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Sigma factor RpoE (sigma 24); Belongs to the sigma-70 factor family. ECF subfamily.	0.877
rpoA	rpoZ	Lche_3349	Lche_1064	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.998
rpoB	rpoA	Lche_3380	Lche_3349	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoC	Lche_3380	Lche_3379	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoB	rpoE	Lche_3380	Lche_1480	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Sigma factor RpoE (sigma 24); Belongs to the sigma-70 factor family. ECF subfamily.	0.889
rpoB	rpoZ	Lche_3380	Lche_1064	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.995
rpoC	rpoA	Lche_3379	Lche_3349	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoC	rpoB	Lche_3379	Lche_3380	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999