ydgR protein (Legionella cherrii) - STRING interaction network

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Score

ydgR

Peptide transport protein. (507 aa)

Predicted Functional Partners:

mnmC

0.840

prpC

0.716

prpB

0.715

hemL

0.698

prpD

0.629

YveA_2

0.493

rubR

0.463

LysP_2

0.439

LysP_1

0.410

Your Current Organism:

Legionella cherrii

NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LysP_1	YveA_2	Lche_1098	Lche_1846	Amino acid (lysine) permease.	Amino acid permease.	0.681
LysP_1	ydgR	Lche_1098	Lche_1520	Amino acid (lysine) permease.	Peptide transport protein.	0.410
LysP_2	YveA_2	Lche_2449	Lche_1846	Amino acid (lysine) permease.	Amino acid permease.	0.617
LysP_2	ydgR	Lche_2449	Lche_1520	Amino acid (lysine) permease.	Peptide transport protein.	0.439
YveA_2	LysP_1	Lche_1846	Lche_1098	Amino acid permease.	Amino acid (lysine) permease.	0.681
YveA_2	LysP_2	Lche_1846	Lche_2449	Amino acid permease.	Amino acid (lysine) permease.	0.617
YveA_2	ydgR	Lche_1846	Lche_1520	Amino acid permease.	Peptide transport protein.	0.493
hemL	mnmC	Lche_1519	Lche_1521	Glutamate-1-semialdehyde-2,1-aminomutase.	FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.	0.699
hemL	prpB	Lche_1519	Lche_1522	Glutamate-1-semialdehyde-2,1-aminomutase.	2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.	0.552
hemL	prpC	Lche_1519	Lche_1523	Glutamate-1-semialdehyde-2,1-aminomutase.	2-methylcitrate synthase; Belongs to the citrate synthase family.	0.430
hemL	rubR	Lche_1519	Lche_1518	Glutamate-1-semialdehyde-2,1-aminomutase.	Rubredoxin.	0.747
hemL	ydgR	Lche_1519	Lche_1520	Glutamate-1-semialdehyde-2,1-aminomutase.	Peptide transport protein.	0.698
mnmC	hemL	Lche_1521	Lche_1519	FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.	Glutamate-1-semialdehyde-2,1-aminomutase.	0.699
mnmC	prpB	Lche_1521	Lche_1522	FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.	2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.	0.732
mnmC	prpC	Lche_1521	Lche_1523	FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.	2-methylcitrate synthase; Belongs to the citrate synthase family.	0.725
mnmC	prpD	Lche_1521	Lche_1524	FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.	2-methylcitrate dehydratase.	0.629
mnmC	rubR	Lche_1521	Lche_1518	FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.	Rubredoxin.	0.451
mnmC	ydgR	Lche_1521	Lche_1520	FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.	Peptide transport protein.	0.840
prpB	hemL	Lche_1522	Lche_1519	2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.	Glutamate-1-semialdehyde-2,1-aminomutase.	0.552
prpB	mnmC	Lche_1522	Lche_1521	2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.	FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.	0.732