STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AdhTAlcohol dehydrogenase. (329 aa)    
Predicted Functional Partners:
frmA
Alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 
0.933
YahK_1
Zinc-type alcohol dehydrogenase-like protein.
  
  
 
0.918
Pdc
Pyruvate decarboxylase.
   
 
 0.914
ywdH
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.912
AlkB2
Alkane monooxygenase.
     
  0.900
Mdh_2
Alcohol dehydrogenase.
  
 
 0.709
HspA_2
Heat shock protein; Belongs to the small heat shock protein (HSP20) family.
  
   0.617
Pta
Phosphate acetyl/butaryl transferase.
  
  
 0.562
GadC_2
Amino acid antiporter.
  
   0.534
ackA
Acetate kinase (Acetokinase); Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
  
 0.516
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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