STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
aphSpectinomycin phosphotransferase. (331 aa)    
Predicted Functional Partners:
aacA4
Aminoglycoside N(6')acetyltransferase.
  
     0.753
Lche_2914
N-acetyltransferase GCN5.
  
     0.748
Lche_0310
GNAT family acetyltransferase.
  
     0.719
grpB
Glutamate rich protein GrpB.
 
     0.715
Lche_1139
Substrate of the Dot/Icm secretion system.
  
     0.684
Lche_0112
N-acetyltransferase GCN5.
  
     0.557
Lche_0534
Integral membrane protein (PIN domain superfamily).
  
     0.529
AacA-aphD
Aminoglycoside 6'-N-acetyltransferase.
  
     0.526
Lche_0836
Fe-S protein.
  
     0.512
Lche_0877
GNAT family acetyltransferase.
 
     0.507
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.