yjbN protein (Legionella cherrii) - STRING interaction network

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yjbN

tRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (302 aa)

Predicted Functional Partners:

fis_1

0.646

Fis_2

0.646

fis_2

0.646

panC

0.590

recJ

0.545

proS

0.541

yfdZ

0.508

Lche_1692

0.504

sun

0.493

guaA

0.468

Your Current Organism:

Legionella cherrii

NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Fis_2	yjbN	Lche_1393	Lche_1690	Fis family transcriptional regulator; Belongs to the transcriptional regulatory Fis family.	tRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	0.646
Lche_1692	recJ	Lche_1692	Lche_1691	Hypothetical protein.	Single-stranded-DNA-specific exonuclease RecJ.	0.800
Lche_1692	yfdZ	Lche_1692	Lche_1693	Hypothetical protein.	Aminotransferase, PLP-dependent.	0.800
Lche_1692	yjbN	Lche_1692	Lche_1690	Hypothetical protein.	tRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	0.504
fis_1	yjbN	Lche_0456	Lche_1690	Global DNA-binding transcriptional dual regulator; Belongs to the transcriptional regulatory Fis family.	tRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	0.646
fis_2	yjbN	Lche_1787	Lche_1690	Global DNA-binding transcriptional dual regulator; Belongs to the transcriptional regulatory Fis family.	tRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	0.646
guaA	panC	Lche_1420	Lche_0432	GMP synthetase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.	Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.	0.505
guaA	proS	Lche_1420	Lche_0949	GMP synthetase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.	prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]	0.744
guaA	yjbN	Lche_1420	Lche_1690	GMP synthetase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.	tRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	0.468
panC	guaA	Lche_0432	Lche_1420	Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.	GMP synthetase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.	0.505
panC	yjbN	Lche_0432	Lche_1690	Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.	tRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	0.590
proS	guaA	Lche_0949	Lche_1420	prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]	GMP synthetase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.	0.744
proS	yjbN	Lche_0949	Lche_1690	prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]	tRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	0.541
recJ	Lche_1692	Lche_1691	Lche_1692	Single-stranded-DNA-specific exonuclease RecJ.	Hypothetical protein.	0.800
recJ	yfdZ	Lche_1691	Lche_1693	Single-stranded-DNA-specific exonuclease RecJ.	Aminotransferase, PLP-dependent.	0.800
recJ	yjbN	Lche_1691	Lche_1690	Single-stranded-DNA-specific exonuclease RecJ.	tRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	0.545
sun	yjbN	Lche_0375	Lche_1690	Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	tRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	0.493
yfdZ	Lche_1692	Lche_1693	Lche_1692	Aminotransferase, PLP-dependent.	Hypothetical protein.	0.800
yfdZ	recJ	Lche_1693	Lche_1691	Aminotransferase, PLP-dependent.	Single-stranded-DNA-specific exonuclease RecJ.	0.800
yfdZ	yjbN	Lche_1693	Lche_1690	Aminotransferase, PLP-dependent.	tRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	0.508

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