Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lche_1701 | Lche_1702 | Lche_1701 | Lche_1702 | Acyltransferase. | Inner membrane protein AmpE. | 0.616 |
Lche_1701 | aceE | Lche_1701 | Lche_1700 | Acyltransferase. | Pyruvate dehydrogenase (decarboxylase component) E1p; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.749 |
Lche_1701 | kefC_1 | Lche_1701 | Lche_1703 | Acyltransferase. | Sodium/hydrogen antiporter. | 0.616 |
Lche_1701 | rlpA-2 | Lche_1701 | Lche_1704 | Acyltransferase. | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.420 |
Lche_1702 | Lche_1701 | Lche_1702 | Lche_1701 | Inner membrane protein AmpE. | Acyltransferase. | 0.616 |
Lche_1702 | aceE | Lche_1702 | Lche_1700 | Inner membrane protein AmpE. | Pyruvate dehydrogenase (decarboxylase component) E1p; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.581 |
Lche_1702 | kefC_1 | Lche_1702 | Lche_1703 | Inner membrane protein AmpE. | Sodium/hydrogen antiporter. | 0.800 |
Lche_1702 | rlpA-2 | Lche_1702 | Lche_1704 | Inner membrane protein AmpE. | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.508 |
aceE | Lche_1701 | Lche_1700 | Lche_1701 | Pyruvate dehydrogenase (decarboxylase component) E1p; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Acyltransferase. | 0.749 |
aceE | Lche_1702 | Lche_1700 | Lche_1702 | Pyruvate dehydrogenase (decarboxylase component) E1p; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Inner membrane protein AmpE. | 0.581 |
aceE | kefC_1 | Lche_1700 | Lche_1703 | Pyruvate dehydrogenase (decarboxylase component) E1p; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Sodium/hydrogen antiporter. | 0.581 |
aceE | rlpA-2 | Lche_1700 | Lche_1704 | Pyruvate dehydrogenase (decarboxylase component) E1p; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.402 |
kefC_1 | Lche_1701 | Lche_1703 | Lche_1701 | Sodium/hydrogen antiporter. | Acyltransferase. | 0.616 |
kefC_1 | Lche_1702 | Lche_1703 | Lche_1702 | Sodium/hydrogen antiporter. | Inner membrane protein AmpE. | 0.800 |
kefC_1 | aceE | Lche_1703 | Lche_1700 | Sodium/hydrogen antiporter. | Pyruvate dehydrogenase (decarboxylase component) E1p; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.581 |
kefC_1 | rlpA-2 | Lche_1703 | Lche_1704 | Sodium/hydrogen antiporter. | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.508 |
rlpA-2 | Lche_1701 | Lche_1704 | Lche_1701 | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | Acyltransferase. | 0.420 |
rlpA-2 | Lche_1702 | Lche_1704 | Lche_1702 | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | Inner membrane protein AmpE. | 0.508 |
rlpA-2 | aceE | Lche_1704 | Lche_1700 | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | Pyruvate dehydrogenase (decarboxylase component) E1p; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.402 |
rlpA-2 | kefC_1 | Lche_1704 | Lche_1703 | Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | Sodium/hydrogen antiporter. | 0.508 |