Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lche_1792 | YaaA | Lche_1792 | Lche_1791 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0246 family. | 0.623 |
Lche_1792 | glnA | Lche_1792 | Lche_1793 | Hypothetical protein. | Glutamine synthetase. | 0.786 |
Lche_1792 | lspF | Lche_1792 | Lche_1794 | Hypothetical protein. | Type II secretory pathway protein LspF. | 0.592 |
Lche_1792 | lspG | Lche_1792 | Lche_1795 | Hypothetical protein. | Type II secretory pathway protein LspG. | 0.527 |
Lche_1792 | lspH | Lche_1792 | Lche_1796 | Hypothetical protein. | Type II secretory pathway protein LspH. | 0.631 |
Lche_1792 | lspI | Lche_1792 | Lche_1797 | Hypothetical protein. | Type II secretory pathway protein LspI. | 0.637 |
Lche_1792 | lspJ | Lche_1792 | Lche_1798 | Hypothetical protein. | Type II secretory pathway protein LspJ. | 0.584 |
Lche_1792 | lspK | Lche_1792 | Lche_1799 | Hypothetical protein. | Type II secretory pathway protein LspK. | 0.583 |
Lche_1792 | pilF | Lche_1792 | Lche_1503 | Hypothetical protein. | Twitching motility protein PilF. | 0.653 |
Lche_1792 | pilP | Lche_1792 | Lche_1031 | Hypothetical protein. | Tfp pilus assembly protein PilP. | 0.490 |
YaaA | Lche_1792 | Lche_1791 | Lche_1792 | Hypothetical protein; Belongs to the UPF0246 family. | Hypothetical protein. | 0.623 |
YaaA | glnA | Lche_1791 | Lche_1793 | Hypothetical protein; Belongs to the UPF0246 family. | Glutamine synthetase. | 0.613 |
YaaA | lspF | Lche_1791 | Lche_1794 | Hypothetical protein; Belongs to the UPF0246 family. | Type II secretory pathway protein LspF. | 0.477 |
YaaA | lspH | Lche_1791 | Lche_1796 | Hypothetical protein; Belongs to the UPF0246 family. | Type II secretory pathway protein LspH. | 0.437 |
YaaA | lspK | Lche_1791 | Lche_1799 | Hypothetical protein; Belongs to the UPF0246 family. | Type II secretory pathway protein LspK. | 0.437 |
glnA | Lche_1792 | Lche_1793 | Lche_1792 | Glutamine synthetase. | Hypothetical protein. | 0.786 |
glnA | YaaA | Lche_1793 | Lche_1791 | Glutamine synthetase. | Hypothetical protein; Belongs to the UPF0246 family. | 0.613 |
glnA | lspF | Lche_1793 | Lche_1794 | Glutamine synthetase. | Type II secretory pathway protein LspF. | 0.601 |
glnA | lspG | Lche_1793 | Lche_1795 | Glutamine synthetase. | Type II secretory pathway protein LspG. | 0.569 |
glnA | lspH | Lche_1793 | Lche_1796 | Glutamine synthetase. | Type II secretory pathway protein LspH. | 0.569 |
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