STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lche_1792Hypothetical protein. (182 aa)    
Predicted Functional Partners:
glnA
Glutamine synthetase.
       0.831
lspI
Type II secretory pathway protein LspI.
 
     0.774
lspH
Type II secretory pathway protein LspH.
 
     0.770
YaaA
Hypothetical protein; Belongs to the UPF0246 family.
       0.752
lspK
Type II secretory pathway protein LspK.
 
     0.740
lspF
Type II secretory pathway protein LspF.
       0.737
lspJ
Type II secretory pathway protein LspJ.
 
     0.708
lspG
Type II secretory pathway protein LspG.
       0.706
AcdS
1-aminocyclopropane-1-carboxylate deaminase.
       0.666
pilF
Twitching motility protein PilF.
  
     0.653
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.