Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LagD | mdlB | Lche_3138 | Lche_1810 | Toxin secretion ABC transporter ATP-binding protein. | Multidrug ABC transporter ATPase/permease. | 0.741 |
Lche_1834 | Lche_2715 | Lche_1834 | Lche_2715 | acyl-CoA synthetase. | acyl-CoA synthetase. | 0.997 |
Lche_1834 | PksJ_2 | Lche_1834 | Lche_0505 | acyl-CoA synthetase. | Hypothetical protein. | 0.998 |
Lche_1834 | dnaK | Lche_1834 | Lche_2401 | acyl-CoA synthetase. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.523 |
Lche_1834 | ftsE | Lche_1834 | Lche_0426 | acyl-CoA synthetase. | Cell division ATP transporter FtsE; Part of the ABC transporter FtsEX involved in cellular division. | 0.514 |
Lche_1834 | mdlB | Lche_1834 | Lche_1810 | acyl-CoA synthetase. | Multidrug ABC transporter ATPase/permease. | 0.634 |
Lche_1834 | pksJ_1 | Lche_1834 | Lche_0504 | acyl-CoA synthetase. | Polyketide synthase, type I. | 0.997 |
Lche_1834 | thrS | Lche_1834 | Lche_0391 | acyl-CoA synthetase. | threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.484 |
Lche_2124 | Lche_2125 | Lche_2124 | Lche_2125 | ABC transporter ATP binding transmembrane protein. | ATP-binding transmembrane ABC transporter. | 0.817 |
Lche_2124 | dnaK | Lche_2124 | Lche_2401 | ABC transporter ATP binding transmembrane protein. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.534 |
Lche_2124 | mdlB | Lche_2124 | Lche_1810 | ABC transporter ATP binding transmembrane protein. | Multidrug ABC transporter ATPase/permease. | 0.598 |
Lche_2125 | Lche_2124 | Lche_2125 | Lche_2124 | ATP-binding transmembrane ABC transporter. | ABC transporter ATP binding transmembrane protein. | 0.817 |
Lche_2125 | dnaK | Lche_2125 | Lche_2401 | ATP-binding transmembrane ABC transporter. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.491 |
Lche_2125 | mdlB | Lche_2125 | Lche_1810 | ATP-binding transmembrane ABC transporter. | Multidrug ABC transporter ATPase/permease. | 0.602 |
Lche_2715 | Lche_1834 | Lche_2715 | Lche_1834 | acyl-CoA synthetase. | acyl-CoA synthetase. | 0.997 |
Lche_2715 | PksJ_2 | Lche_2715 | Lche_0505 | acyl-CoA synthetase. | Hypothetical protein. | 0.998 |
Lche_2715 | dnaK | Lche_2715 | Lche_2401 | acyl-CoA synthetase. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.523 |
Lche_2715 | ftsE | Lche_2715 | Lche_0426 | acyl-CoA synthetase. | Cell division ATP transporter FtsE; Part of the ABC transporter FtsEX involved in cellular division. | 0.514 |
Lche_2715 | mdlB | Lche_2715 | Lche_1810 | acyl-CoA synthetase. | Multidrug ABC transporter ATPase/permease. | 0.634 |
Lche_2715 | pksJ_1 | Lche_2715 | Lche_0504 | acyl-CoA synthetase. | Polyketide synthase, type I. | 0.997 |
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