Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lche_1821 | Lche_1822 | Lche_1821 | Lche_1822 | Hypothetical protein. | Hypothetical protein. | 0.773 |
Lche_1821 | YdfG_2 | Lche_1821 | Lche_1819 | Hypothetical protein. | Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.406 |
Lche_1821 | fabG_4 | Lche_1821 | Lche_1818 | Hypothetical protein. | 3-oxoacyl-ACP reductase. | 0.406 |
Lche_1821 | folE_1 | Lche_1821 | Lche_1820 | Hypothetical protein. | GTP cyclohydrolase I. | 0.516 |
Lche_1821 | phaB_2 | Lche_1821 | Lche_1823 | Hypothetical protein. | Pteridine reductase. | 0.529 |
Lche_1822 | Lche_1821 | Lche_1822 | Lche_1821 | Hypothetical protein. | Hypothetical protein. | 0.773 |
Lche_1822 | YdfG_2 | Lche_1822 | Lche_1819 | Hypothetical protein. | Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.406 |
Lche_1822 | fabG_4 | Lche_1822 | Lche_1818 | Hypothetical protein. | 3-oxoacyl-ACP reductase. | 0.406 |
Lche_1822 | folE_1 | Lche_1822 | Lche_1820 | Hypothetical protein. | GTP cyclohydrolase I. | 0.516 |
Lche_1822 | phaB_2 | Lche_1822 | Lche_1823 | Hypothetical protein. | Pteridine reductase. | 0.545 |
YdfG_2 | Lche_1821 | Lche_1819 | Lche_1821 | Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein. | 0.406 |
YdfG_2 | Lche_1822 | Lche_1819 | Lche_1822 | Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein. | 0.406 |
YdfG_2 | fabG_4 | Lche_1819 | Lche_1818 | Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 3-oxoacyl-ACP reductase. | 0.847 |
YdfG_2 | folE_1 | Lche_1819 | Lche_1820 | Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | GTP cyclohydrolase I. | 0.596 |
YdfG_2 | phaB_2 | Lche_1819 | Lche_1823 | Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Pteridine reductase. | 0.844 |
fabG_4 | Lche_1821 | Lche_1818 | Lche_1821 | 3-oxoacyl-ACP reductase. | Hypothetical protein. | 0.406 |
fabG_4 | Lche_1822 | Lche_1818 | Lche_1822 | 3-oxoacyl-ACP reductase. | Hypothetical protein. | 0.406 |
fabG_4 | YdfG_2 | Lche_1818 | Lche_1819 | 3-oxoacyl-ACP reductase. | Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.847 |
fabG_4 | folE_1 | Lche_1818 | Lche_1820 | 3-oxoacyl-ACP reductase. | GTP cyclohydrolase I. | 0.628 |
fabG_4 | phaB_2 | Lche_1818 | Lche_1823 | 3-oxoacyl-ACP reductase. | Pteridine reductase. | 0.835 |
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