STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YveA_2Amino acid permease. (509 aa)    
Predicted Functional Partners:
LysP_1
Amino acid (lysine) permease.
  
   
 0.685
LysP_2
Amino acid (lysine) permease.
  
   
 0.622
steT
Serine/threonine exchanger SteT.
  
     0.588
IraB
Hypothetical protein.
  
 
 0.556
yhiP
Transporter.
  
 
 0.499
YgdD
Hypothetical protein.
       0.488
ydgR
Peptide transport protein.
  
 
 0.484
GadC_3
Amino acid antiporter.
  
     0.461
DtpA_2
Proton-dependent oligopeptide transporter (POT family).
  
 
 0.440
clcA
Chloride channel, voltage-gated.
  
 
 
 0.418
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.