rnc protein (Legionella cherrii) - STRING interaction network

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rnc

Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. (226 aa)

Predicted Functional Partners:

prfB

0.928

lepB_2

0.922

pksJ_1

0.901

Lche_1834

0.901

Lche_2715

0.901

rplQ

0.894

rplS

0.893

rpmF

0.891

Lche_1716

0.889

rplT

0.888

Your Current Organism:

Legionella cherrii

NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Lche_1716	rnc	Lche_1716	Lche_1898	TrpH protein.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.889
Lche_1834	Lche_2715	Lche_1834	Lche_2715	acyl-CoA synthetase.	acyl-CoA synthetase.	0.999
Lche_1834	pksJ_1	Lche_1834	Lche_0504	acyl-CoA synthetase.	Polyketide synthase, type I.	0.999
Lche_1834	prfB	Lche_1834	Lche_1280	acyl-CoA synthetase.	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	0.501
Lche_1834	rnc	Lche_1834	Lche_1898	acyl-CoA synthetase.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.901
Lche_1834	rplQ	Lche_1834	Lche_3348	acyl-CoA synthetase.	50S ribosomal protein L17.	0.916
Lche_1834	rplS	Lche_1834	Lche_3286	acyl-CoA synthetase.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.890
Lche_1834	rplT	Lche_1834	Lche_0393	acyl-CoA synthetase.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.904
Lche_1834	rpmF	Lche_1834	Lche_1769	acyl-CoA synthetase.	50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.761
Lche_2715	Lche_1834	Lche_2715	Lche_1834	acyl-CoA synthetase.	acyl-CoA synthetase.	0.999
Lche_2715	pksJ_1	Lche_2715	Lche_0504	acyl-CoA synthetase.	Polyketide synthase, type I.	0.999
Lche_2715	prfB	Lche_2715	Lche_1280	acyl-CoA synthetase.	Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.	0.501
Lche_2715	rnc	Lche_2715	Lche_1898	acyl-CoA synthetase.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.901
Lche_2715	rplQ	Lche_2715	Lche_3348	acyl-CoA synthetase.	50S ribosomal protein L17.	0.916
Lche_2715	rplS	Lche_2715	Lche_3286	acyl-CoA synthetase.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.890
Lche_2715	rplT	Lche_2715	Lche_0393	acyl-CoA synthetase.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.904
Lche_2715	rpmF	Lche_2715	Lche_1769	acyl-CoA synthetase.	50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.761
lepB_2	pksJ_1	Lche_1900	Lche_0504	Signal peptidase I; Belongs to the peptidase S26 family.	Polyketide synthase, type I.	0.417
lepB_2	rnc	Lche_1900	Lche_1898	Signal peptidase I; Belongs to the peptidase S26 family.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.922
lepB_2	rpmF	Lche_1900	Lche_1769	Signal peptidase I; Belongs to the peptidase S26 family.	50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.643

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