Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EpsM | Lche_1903 | Lche_1904 | Lche_1903 | General secretion pathway protein. | General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | 0.995 |
EpsM | QorA | Lche_1904 | Lche_1905 | General secretion pathway protein. | Quinone oxidoreductase. | 0.503 |
EpsM | mltB_1 | Lche_1904 | Lche_1902 | General secretion pathway protein. | Membrane-bound lytic murein transglycosylase B. | 0.800 |
Lche_1834 | Lche_2715 | Lche_1834 | Lche_2715 | acyl-CoA synthetase. | acyl-CoA synthetase. | 0.997 |
Lche_1834 | PksJ_2 | Lche_1834 | Lche_0505 | acyl-CoA synthetase. | Hypothetical protein. | 0.998 |
Lche_1834 | PksJ_4 | Lche_1834 | Lche_0862 | acyl-CoA synthetase. | Polyketide synthase. | 0.994 |
Lche_1834 | QorA | Lche_1834 | Lche_1905 | acyl-CoA synthetase. | Quinone oxidoreductase. | 0.823 |
Lche_1834 | fadB | Lche_1834 | Lche_1358 | acyl-CoA synthetase. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.950 |
Lche_1834 | pksJ_1 | Lche_1834 | Lche_0504 | acyl-CoA synthetase. | Polyketide synthase, type I. | 0.997 |
Lche_1834 | yfcX | Lche_1834 | Lche_1464 | acyl-CoA synthetase. | Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.950 |
Lche_1903 | EpsM | Lche_1903 | Lche_1904 | General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | General secretion pathway protein. | 0.995 |
Lche_1903 | QorA | Lche_1903 | Lche_1905 | General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Quinone oxidoreductase. | 0.503 |
Lche_1903 | mltB_1 | Lche_1903 | Lche_1902 | General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Membrane-bound lytic murein transglycosylase B. | 0.800 |
Lche_2715 | Lche_1834 | Lche_2715 | Lche_1834 | acyl-CoA synthetase. | acyl-CoA synthetase. | 0.997 |
Lche_2715 | PksJ_2 | Lche_2715 | Lche_0505 | acyl-CoA synthetase. | Hypothetical protein. | 0.998 |
Lche_2715 | PksJ_4 | Lche_2715 | Lche_0862 | acyl-CoA synthetase. | Polyketide synthase. | 0.994 |
Lche_2715 | QorA | Lche_2715 | Lche_1905 | acyl-CoA synthetase. | Quinone oxidoreductase. | 0.823 |
Lche_2715 | fadB | Lche_2715 | Lche_1358 | acyl-CoA synthetase. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.950 |
Lche_2715 | pksJ_1 | Lche_2715 | Lche_0504 | acyl-CoA synthetase. | Polyketide synthase, type I. | 0.997 |
Lche_2715 | yfcX | Lche_2715 | Lche_1464 | acyl-CoA synthetase. | Enoyl CoA hydratase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.950 |
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