Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
HipBPutative DNA-binding transcriptional regulator. (82 aa)    
Predicted Functional Partners:
hipA
HipA protein, DNA binding regulator.
 
  
 0.958
recA
Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
     
 0.648
comEA
Competence protein ComEA.
      
 0.618
FimT
Type IV pre-pilin.
      
 0.618
PilX
Tfp pilus assembly protein PilX.
      
 0.618
pilQ
Type IV pilus (Tfp) assembly protein PilQ.
      
 0.578
pilC
Pilus assembly protein PilC.
      
 0.573
Lche_1974
Hypothetical protein.
       0.455
Lche_0056
Putative conserved hypothetical protein, some similarity with stress proteins.
  
     0.439
Lche_1977
Polysaccharide deacetylase.
       0.429
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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