close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aaeBP-hydroxybenzoic acid efflux pump subunit AaeB. (706 aa)    
Predicted Functional Partners:
EmrA_4
Hemolysin D.
 
  
 0.884
Lche_0524
Dihydroorotate dehydrogenase electron transfer subunit.
  
   
 0.777
Lche_0535
Hypothetical protein.
  
     0.773
Lche_0229
Transporter family transporter protein.
  
     0.771
SseJ_2
Phospholipase/lecithinase/hemolysin.
  
     0.766
Lche_0040
Trans-aconitate 2-methyltransferase.
  
     0.757
Lche_2996
RasGEF domain protein.
  
     0.756
Lche_2573
Multidrug efflux protein.
  
     0.744
Lche_2559
Pyoverdine biosynthesis regulatory protein SyrP-like protein.
  
     0.743
Lche_2247
Ankyrin repeat-containing protein.
  
     0.731
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.