STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EmrA_4Hemolysin D. (331 aa)    
Predicted Functional Partners:
aaeB
P-hydroxybenzoic acid efflux pump subunit AaeB.
 
  
 0.884
emrB_1
Multidrug efflux system protein; Belongs to the major facilitator superfamily.
  
 
 0.792
emrB_2
Multidrug efflux system protein; Belongs to the major facilitator superfamily.
  
 
 0.791
emrB_4
Multidrug efflux system protein; Belongs to the major facilitator superfamily.
  
 
 0.783
EmrB_4
Multidrug resistance protein, MFS superfamily.
  
   0.780
HsrA
Multidrug efflux protein; Belongs to the major facilitator superfamily.
  
 
 0.598
MacB_2
ABC transporter permease.
 
  
 0.541
Lche_1981
Hypothetical protein.
       0.528
Lche_1982
Hypothetical protein.
       0.528
Lche_1983
Hypothetical protein.
       0.528
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.