STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YrbABolA like protein; Belongs to the BolA/IbaG family. (81 aa)    
Predicted Functional Partners:
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
  
 0.849
Lche_2034
Putative NIF3-like protein 1.
 
     0.843
yrbD
Toluene transporter subunit: membrane component of ABC superfamily protein.
     
 0.543
grlA
Glutaredoxin-like protein; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 
 
 0.532
yrbF
Toluene transporter subunit: ATP-binding component of ABC superfamily protein.
     
 0.523
Lche_2037
Anti-anti-sigma factor.
       0.512
ttg2D
Toluene tolerance protein Ttg2D.
       0.512
yrbE
Toluene transporter subunit: membrane component of ABC superfamily protein.
       0.510
rpsU
30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
   
    0.482
sspA
Stringent starvation protein A.
 
     0.477
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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