Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AsnB_2 | YgeA | Lche_2742 | Lche_3262 | Asparagine synthetase, glutamine-hydrolyzing. | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | 0.912 |
AsnB_2 | argG | Lche_2742 | Lche_1403 | Asparagine synthetase, glutamine-hydrolyzing. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.919 |
AsnB_2 | asg | Lche_2742 | Lche_2785 | Asparagine synthetase, glutamine-hydrolyzing. | L-asparaginase I. | 0.914 |
AsnB_2 | asnA | Lche_2742 | Lche_2721 | Asparagine synthetase, glutamine-hydrolyzing. | Asparagine synthetase A. | 0.918 |
AsnB_2 | iaaA | Lche_2742 | Lche_2429 | Asparagine synthetase, glutamine-hydrolyzing. | Isoaspartyl dipeptidase with L-asparaginase activity. | 0.911 |
AsnB_2 | nadB | Lche_2742 | Lche_2077 | Asparagine synthetase, glutamine-hydrolyzing. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.900 |
AsnB_2 | purA | Lche_2742 | Lche_0715 | Asparagine synthetase, glutamine-hydrolyzing. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.916 |
AsnB_2 | pyrB | Lche_2742 | Lche_0675 | Asparagine synthetase, glutamine-hydrolyzing. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.919 |
YgeA | AsnB_2 | Lche_3262 | Lche_2742 | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | Asparagine synthetase, glutamine-hydrolyzing. | 0.912 |
YgeA | argG | Lche_3262 | Lche_1403 | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.900 |
YgeA | asg | Lche_3262 | Lche_2785 | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | L-asparaginase I. | 0.917 |
YgeA | asnA | Lche_3262 | Lche_2721 | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | Asparagine synthetase A. | 0.900 |
YgeA | iaaA | Lche_3262 | Lche_2429 | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | Isoaspartyl dipeptidase with L-asparaginase activity. | 0.900 |
YgeA | nadB | Lche_3262 | Lche_2077 | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.902 |
YgeA | purA | Lche_3262 | Lche_0715 | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.900 |
YgeA | pyrB | Lche_3262 | Lche_0675 | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.915 |
argG | AsnB_2 | Lche_1403 | Lche_2742 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Asparagine synthetase, glutamine-hydrolyzing. | 0.919 |
argG | YgeA | Lche_1403 | Lche_3262 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | 0.900 |
argG | asg | Lche_1403 | Lche_2785 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | L-asparaginase I. | 0.911 |
argG | asnA | Lche_1403 | Lche_2721 | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | Asparagine synthetase A. | 0.903 |
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