STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lche_2110ABC transporter ATP-binding protein. (87 aa)    
Predicted Functional Partners:
MlaE
ABC transporter permease.
 
 0.997
Lche_2109
Mammalian cell entry related domain protein.
 
 0.995
yrbE
Toluene transporter subunit: membrane component of ABC superfamily protein.
 
 0.990
yrbD
Toluene transporter subunit: membrane component of ABC superfamily protein.
  
 0.982
Lche_2037
Anti-anti-sigma factor.
  
 0.967
yrbF
Toluene transporter subunit: ATP-binding component of ABC superfamily protein.
  
  
 
0.909
Lche_2108
Transport protein.
 
    0.887
ttg2D
Toluene tolerance protein Ttg2D.
  
 
 0.870
pal
Peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL); Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
     
 0.684
cpoB
Outer membrane protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
       0.680
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.