STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lche_2124ABC transporter ATP binding transmembrane protein. (501 aa)    
Predicted Functional Partners:
Lche_2125
ATP-binding transmembrane ABC transporter.
 
    
0.832
Lche_2123
Hypothetical protein.
       0.554
Lche_2126
D-xylose reductase III.
       0.526
Lche_2127
GNAT family acetyltransferase.
  
    0.516
Lche_0070
Multidrug resistance ABC transporter ATP binding protein.
  
 
0.490
msbA
Lipid A export ATP-binding/permease MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
  
 
0.489
abcT
ABC transporter ATP-binding protein.
  
 
0.484
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
   
 0.482
Lche_2128
NYN domain protein.
       0.472
uup_1
ABC transporter ATP-binding protein Uup.
  
   
 0.461
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
Server load: low (12%) [HD]