Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lche_2124 | Lche_2125 | Lche_2124 | Lche_2125 | ABC transporter ATP binding transmembrane protein. | ATP-binding transmembrane ABC transporter. | 0.817 |
Lche_2124 | Lche_2126 | Lche_2124 | Lche_2126 | ABC transporter ATP binding transmembrane protein. | D-xylose reductase III. | 0.526 |
Lche_2124 | Lche_2127 | Lche_2124 | Lche_2127 | ABC transporter ATP binding transmembrane protein. | GNAT family acetyltransferase. | 0.518 |
Lche_2124 | Lche_2128 | Lche_2124 | Lche_2128 | ABC transporter ATP binding transmembrane protein. | NYN domain protein. | 0.472 |
Lche_2124 | Lche_2129 | Lche_2124 | Lche_2129 | ABC transporter ATP binding transmembrane protein. | Nucleoside triphosphate pyrophosphohydrolase MazG. | 0.453 |
Lche_2125 | Lche_2124 | Lche_2125 | Lche_2124 | ATP-binding transmembrane ABC transporter. | ABC transporter ATP binding transmembrane protein. | 0.817 |
Lche_2125 | Lche_2126 | Lche_2125 | Lche_2126 | ATP-binding transmembrane ABC transporter. | D-xylose reductase III. | 0.526 |
Lche_2125 | Lche_2127 | Lche_2125 | Lche_2127 | ATP-binding transmembrane ABC transporter. | GNAT family acetyltransferase. | 0.518 |
Lche_2125 | Lche_2128 | Lche_2125 | Lche_2128 | ATP-binding transmembrane ABC transporter. | NYN domain protein. | 0.472 |
Lche_2125 | Lche_2129 | Lche_2125 | Lche_2129 | ATP-binding transmembrane ABC transporter. | Nucleoside triphosphate pyrophosphohydrolase MazG. | 0.453 |
Lche_2126 | Lche_2124 | Lche_2126 | Lche_2124 | D-xylose reductase III. | ABC transporter ATP binding transmembrane protein. | 0.526 |
Lche_2126 | Lche_2125 | Lche_2126 | Lche_2125 | D-xylose reductase III. | ATP-binding transmembrane ABC transporter. | 0.526 |
Lche_2126 | Lche_2127 | Lche_2126 | Lche_2127 | D-xylose reductase III. | GNAT family acetyltransferase. | 0.759 |
Lche_2126 | Lche_2128 | Lche_2126 | Lche_2128 | D-xylose reductase III. | NYN domain protein. | 0.698 |
Lche_2126 | Lche_2129 | Lche_2126 | Lche_2129 | D-xylose reductase III. | Nucleoside triphosphate pyrophosphohydrolase MazG. | 0.655 |
Lche_2127 | Lche_2124 | Lche_2127 | Lche_2124 | GNAT family acetyltransferase. | ABC transporter ATP binding transmembrane protein. | 0.518 |
Lche_2127 | Lche_2125 | Lche_2127 | Lche_2125 | GNAT family acetyltransferase. | ATP-binding transmembrane ABC transporter. | 0.518 |
Lche_2127 | Lche_2126 | Lche_2127 | Lche_2126 | GNAT family acetyltransferase. | D-xylose reductase III. | 0.759 |
Lche_2127 | Lche_2128 | Lche_2127 | Lche_2128 | GNAT family acetyltransferase. | NYN domain protein. | 0.706 |
Lche_2127 | Lche_2129 | Lche_2127 | Lche_2129 | GNAT family acetyltransferase. | Nucleoside triphosphate pyrophosphohydrolase MazG. | 0.673 |
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