Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Lche_2140 | Lche_2141 | Putative conjugative transfer protein TrbC. | Protein TraU. | 0.943 |
Lche_2140 | Lche_2142 | Putative conjugative transfer protein TrbC. | Protein TraW. | 0.945 |
Lche_2140 | Lche_2143 | Putative conjugative transfer protein TrbC. | Putative F pilus extension/retraction protein trbI. | 0.752 |
Lche_2140 | Lche_2144 | Putative conjugative transfer protein TrbC. | Protein TraC. | 0.942 |
Lche_2140 | Lche_2145 | Putative conjugative transfer protein TrbC. | Conjugative transfer: assembly. | 0.749 |
Lche_2140 | Lche_2146 | Putative conjugative transfer protein TrbC. | Putative conjugative transfer protein TraB. | 0.935 |
Lche_2140 | Lche_2147 | Putative conjugative transfer protein TrbC. | Putative conjugative transfer protein TraK. | 0.723 |
Lche_2140 | Lche_2148 | Putative conjugative transfer protein TrbC. | Putative conjugative transfer protein TraE. | 0.935 |
Lche_2140 | Lche_2149 | Putative conjugative transfer protein TrbC. | Putative sex pilus assembly protein-like protein. | 0.726 |
Lche_2140 | Lche_2150 | Putative conjugative transfer protein TrbC. | Putative fimbrial protein precursor-like protein. | 0.723 |
Lche_2141 | Lche_2140 | Protein TraU. | Putative conjugative transfer protein TrbC. | 0.943 |
Lche_2141 | Lche_2142 | Protein TraU. | Protein TraW. | 0.949 |
Lche_2141 | Lche_2143 | Protein TraU. | Putative F pilus extension/retraction protein trbI. | 0.782 |
Lche_2141 | Lche_2144 | Protein TraU. | Protein TraC. | 0.949 |
Lche_2141 | Lche_2145 | Protein TraU. | Conjugative transfer: assembly. | 0.775 |
Lche_2141 | Lche_2146 | Protein TraU. | Putative conjugative transfer protein TraB. | 0.941 |
Lche_2141 | Lche_2147 | Protein TraU. | Putative conjugative transfer protein TraK. | 0.750 |
Lche_2141 | Lche_2148 | Protein TraU. | Putative conjugative transfer protein TraE. | 0.941 |
Lche_2141 | Lche_2149 | Protein TraU. | Putative sex pilus assembly protein-like protein. | 0.757 |
Lche_2141 | Lche_2150 | Protein TraU. | Putative fimbrial protein precursor-like protein. | 0.750 |
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