STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lche_2163Putative S-isoprenylcysteine methyltransferase. (210 aa)    
Predicted Functional Partners:
Lche_2164
Hypothetical protein.
 
    0.949
phbC_2
Polyhydroxyalkanoic synthase.
 
     0.745
fabI_2
enoyl-ACP reductase.
       0.716
ack
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.716
pta
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
       0.715
Lche_2172
Outer membrane efflux protein.
 
     0.452
Lche_2170
Cation efflux system protein cusA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
     0.417
Lche_1151
Hypothetical protein.
    
  0.407
Lche_1665
Rho GTPase (Miro-like).
    
  0.407
Lche_2339
Hypothetical protein.
    
  0.407
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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