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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lche_2169Hypothetical protein. (370 aa)    
Predicted Functional Partners:
Lche_2170
Cation efflux system protein cusA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.584
cusB
Copper/silver efflux system, membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.533
Lche_2172
Outer membrane efflux protein.
       0.533
Lche_2178
ATP synthase protein I.
 
     0.471
atpC_2
F-type H -transporting ATPase epsilon chain.
 
     0.467
Lche_2173
Hypothetical protein; ATP synthase subunit gamma C-terminus.
 
     0.441
atpB-3
ATP synthase F0F1 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
 
     0.438
CvaA
Putative membrane fusion protein.
  
     0.421
Lche_1085
Hypothetical protein.
  
     0.417
atpF_1
F-type H -transporting ATPase b chain; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
 
     0.410
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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