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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lche_2189Hypothetical protein. (182 aa)    
Predicted Functional Partners:
copA_1
Copper efflux ATPase.
 
     0.727
atpC_1
F-type H -transporting ATPase epsilon chain.
  
     0.701
atpC_2
F-type H -transporting ATPase epsilon chain.
  
     0.701
Lche_2178
ATP synthase protein I.
  
     0.697
Lche_1558
ATP synthase protein I.
  
     0.616
Lche_0163
Putative conjugative transfer protein TrbB.
  
     0.555
Lche_0108
D12 class N6 adenine-specific DNA methyltransferase.
  
     0.513
Lche_2173
Hypothetical protein; ATP synthase subunit gamma C-terminus.
  
     0.504
Lche_2186
Oxidoreductase, FAD-binding protein.
       0.497
Lche_2187
Ferric reductase like transmembrane component.
       0.497
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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